Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm14247-201ENSMUST00000120950 237 ntBASIC9.42□□□□□ -0.9
Chd6A3KFM7 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Gm5259-201ENSMUST00000191231 800 ntBASIC9.42□□□□□ -0.9
Chd6A3KFM7 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Gm44540-201ENSMUST00000205640 354 ntBASIC9.42□□□□□ -0.9
Chd6A3KFM7 AC116797.2-202ENSMUST00000223587 1017 ntBASIC9.42□□□□□ -0.9
Chd6A3KFM7 AC154305.2-201ENSMUST00000225813 901 ntBASIC9.42□□□□□ -0.9
Chd6A3KFM7 AC154407.1-201ENSMUST00000226777 526 ntBASIC9.42□□□□□ -0.9
Chd6A3KFM7 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Gm15374-201ENSMUST00000119313 844 ntBASIC9.41□□□□□ -0.9
Chd6A3KFM7 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC9.41□□□□□ -0.9
Chd6A3KFM7 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC9.41□□□□□ -0.9
Chd6A3KFM7 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC9.41□□□□□ -0.9
Chd6A3KFM7 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC9.41□□□□□ -0.9
Chd6A3KFM7 AC102523.1-201ENSMUST00000228706 1144 ntBASIC9.41□□□□□ -0.9
Chd6A3KFM7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Gm8828-201ENSMUST00000196786 1290 ntBASIC9.41□□□□□ -0.9
Chd6A3KFM7 Gm29783-201ENSMUST00000219398 369 ntBASIC9.41□□□□□ -0.9
Chd6A3KFM7 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Gm6378-201ENSMUST00000084199 444 ntBASIC9.41□□□□□ -0.9
Chd6A3KFM7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Chd6A3KFM7 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.4□□□□□ -0.9
Chd6A3KFM7 Gm5385-201ENSMUST00000118988 1559 ntBASIC9.4□□□□□ -0.9
Chd6A3KFM7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Gm20781-201ENSMUST00000193154 693 ntBASIC9.4□□□□□ -0.9
Chd6A3KFM7 Gm21736-201ENSMUST00000195399 693 ntBASIC9.4□□□□□ -0.9
Chd6A3KFM7 AC155293.1-201ENSMUST00000219793 1026 ntBASIC9.4□□□□□ -0.9
Chd6A3KFM7 AC122356.2-201ENSMUST00000226962 820 ntBASIC9.4□□□□□ -0.9
Chd6A3KFM7 AC107711.3-201ENSMUST00000228939 1035 ntBASIC9.4□□□□□ -0.9
Chd6A3KFM7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.4□□□□□ -0.9
Chd6A3KFM7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Chd6A3KFM7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd6A3KFM7 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms