Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn1aA2APX8 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Erich3-203ENSMUST00000189969 3460 ntBASIC12.21□□□□□ -0.45
Scn1aA2APX8 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Gm8111-201ENSMUST00000117659 987 ntBASIC12.21□□□□□ -0.46
Scn1aA2APX8 Gm14942-201ENSMUST00000119642 336 ntBASIC12.21□□□□□ -0.46
Scn1aA2APX8 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Gm15744-201ENSMUST00000161734 213 ntBASIC12.21□□□□□ -0.46
Scn1aA2APX8 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.21□□□□□ -0.46
Scn1aA2APX8 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.21□□□□□ -0.46
Scn1aA2APX8 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.21□□□□□ -0.46
Scn1aA2APX8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Scn1aA2APX8 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Gm11949-201ENSMUST00000117640 372 ntBASIC12.2□□□□□ -0.46
Scn1aA2APX8 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Gm9089-201ENSMUST00000122027 526 ntBASIC12.2□□□□□ -0.46
Scn1aA2APX8 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.2□□□□□ -0.46
Scn1aA2APX8 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Gm44329-201ENSMUST00000197469 112 ntBASIC12.2□□□□□ -0.46
Scn1aA2APX8 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.2□□□□□ -0.46
Scn1aA2APX8 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Gm44545-201ENSMUST00000208262 746 ntBASIC12.2□□□□□ -0.46
Scn1aA2APX8 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.2□□□□□ -0.46
Scn1aA2APX8 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.2□□□□□ -0.46
Scn1aA2APX8 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scn1aA2APX8 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms