Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Gm9062-201ENSMUST00000117712 727 ntBASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm7848-201ENSMUST00000210739 718 ntBASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm5616-201ENSMUST00000165252 384 ntBASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm8741-201ENSMUST00000174736 384 ntBASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm24514-201ENSMUST00000174961 285 ntBASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.81□□□□□ -0.52
Mrpl40Q9Z2Q5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm12616-201ENSMUST00000118594 382 ntBASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm12624-201ENSMUST00000177615 382 ntBASIC11.8□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm12621-201ENSMUST00000177760 382 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms