Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Gm37905-201ENSMUST00000195310 341 ntBASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Gm4294-201ENSMUST00000105169 614 ntBASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Gm12247-201ENSMUST00000117585 670 ntBASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn8aQ9WTU3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Gm28388-201ENSMUST00000186262 437 ntBASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Gm43852-201ENSMUST00000202098 917 ntBASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Gm25492-201ENSMUST00000157383 129 ntBASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Gm7741-201ENSMUST00000181445 989 ntBASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Gm44329-201ENSMUST00000197469 112 ntBASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Gm44008-201ENSMUST00000204345 412 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms