Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm14193-201ENSMUST00000105067 153 ntBASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm22711-201ENSMUST00000116890 133 ntBASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm3150-201ENSMUST00000166418 204 ntBASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm8420-201ENSMUST00000097103 598 ntBASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.26□□□□□ -0.61
Upk3aQ9JKX8 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Gm12165-201ENSMUST00000117047 342 ntBASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Gm13045-201ENSMUST00000119019 712 ntBASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Gm24844-201ENSMUST00000158679 127 ntBASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Ginm1-202ENSMUST00000065124 300 ntBASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Paupar-201ENSMUST00000194826 3482 ntBASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms