Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Gm16166-201ENSMUST00000118291 787 ntBASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Ube3bQ9ES34 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ube3bQ9ES34 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.96□□□□□ -0.18
Ube3bQ9ES34 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.96□□□□□ -0.18
Ube3bQ9ES34 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
Ube3bQ9ES34 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.96□□□□□ -0.18
Ube3bQ9ES34 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Gm14071-201ENSMUST00000117817 509 ntBASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Gm29013-201ENSMUST00000187431 237 ntBASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.95□□□□□ -0.18
Ube3bQ9ES34 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.95□□□□□ -0.18
Ube3bQ9ES34 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.95□□□□□ -0.18
Ube3bQ9ES34 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube3bQ9ES34 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms