Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Gm27627-201ENSMUST00000183644 150 ntBASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Mir6979-201ENSMUST00000183927 56 ntBASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Cog3-203ENSMUST00000227473 4197 ntBASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.67□□□□□ -0.54
Tubb3Q9ERD7 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Gm11989-201ENSMUST00000117240 672 ntBASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Gm11362-201ENSMUST00000118838 850 ntBASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 B9d1os-201ENSMUST00000137010 674 ntBASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Mir5120-201ENSMUST00000175020 78 ntBASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Gm43002-201ENSMUST00000200310 155 ntBASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Gm17931-201ENSMUST00000208132 634 ntBASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms