Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chmp4cQ9D7F7 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Gm37969-201ENSMUST00000195777 3409 ntBASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Gm37931-201ENSMUST00000194686 2866 ntBASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4cQ9D7F7 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chmp4cQ9D7F7 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Gm4607-201ENSMUST00000206649 577 ntBASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Chmp4cQ9D7F7 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp4cQ9D7F7 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Chmp4cQ9D7F7 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4cQ9D7F7 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4cQ9D7F7 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chmp4cQ9D7F7 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp4cQ9D7F7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4cQ9D7F7 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4cQ9D7F7 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4cQ9D7F7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4cQ9D7F7 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4cQ9D7F7 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Chmp4cQ9D7F7 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14□□□□□ -0.17
Chmp4cQ9D7F7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4cQ9D7F7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14□□□□□ -0.17
Chmp4cQ9D7F7 Gm14726-201ENSMUST00000120623 896 ntBASIC14□□□□□ -0.17
Chmp4cQ9D7F7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms