Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.85□□□□□ -0.51
Ccdc130Q9D516 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc130Q9D516 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Gm8712-201ENSMUST00000221090 701 ntBASIC11.84□□□□□ -0.51
Ccdc130Q9D516 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Gm9899-201ENSMUST00000065519 555 ntBASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc130Q9D516 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc130Q9D516 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Gm23270-201ENSMUST00000104055 131 ntBASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Gm11222-201ENSMUST00000119005 738 ntBASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Gm45865-201ENSMUST00000211815 945 ntBASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Gm9996-201ENSMUST00000070359 913 ntBASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc130Q9D516 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms