Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm24196-201ENSMUST00000179161 110 ntBASIC11.8□□□□□ -0.52
Trim42Q9D2H5 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.8□□□□□ -0.52
Trim42Q9D2H5 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.8□□□□□ -0.52
Trim42Q9D2H5 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Gm11298-201ENSMUST00000120503 1799 ntBASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Gm23984-201ENSMUST00000157139 203 ntBASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Gm25116-201ENSMUST00000157191 122 ntBASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Gm38241-201ENSMUST00000192641 898 ntBASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Gm18711-201ENSMUST00000199341 750 ntBASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Gm29705-201ENSMUST00000212598 474 ntBASIC11.79□□□□□ -0.52
Trim42Q9D2H5 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim42Q9D2H5 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Gm23958-201ENSMUST00000157207 105 ntBASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Gm22331-201ENSMUST00000158066 136 ntBASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms