Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Gm14644-201ENSMUST00000116671 647 ntBASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Gm9230-201ENSMUST00000188228 532 ntBASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.06□□□□□ -0.48
Snf8Q9CZ28 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Gm6013-201ENSMUST00000212264 699 ntBASIC12.05□□□□□ -0.48
Snf8Q9CZ28 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.05□□□□□ -0.48
Snf8Q9CZ28 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Morn2-202ENSMUST00000227729 656 ntBASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snf8Q9CZ28 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.04□□□□□ -0.48
Snf8Q9CZ28 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms