Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx47Q9CWX9 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Ddx47Q9CWX9 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx47Q9CWX9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.04□□□□□ -0.48
Ddx47Q9CWX9 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.04□□□□□ -0.48
Ddx47Q9CWX9 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Ddx47Q9CWX9 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx47Q9CWX9 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx47Q9CWX9 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx47Q9CWX9 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ddx47Q9CWX9 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Gm37201-201ENSMUST00000191845 523 ntBASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Gm5186-201ENSMUST00000218781 920 ntBASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Gm5356-201ENSMUST00000093326 615 ntBASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx47Q9CWX9 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx47Q9CWX9 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Gm12058-201ENSMUST00000118614 437 ntBASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Gm6222-202ENSMUST00000182143 629 ntBASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Gm18893-201ENSMUST00000198416 943 ntBASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Gm17794-201ENSMUST00000220252 955 ntBASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms