Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.36□□□□□ -0.27
Trim11Q99PQ2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Mir1938-201ENSMUST00000158746 100 ntBASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Gm27627-201ENSMUST00000183644 150 ntBASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 AY036118-201ENSMUST00000200021 923 ntBASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Gm45331-201ENSMUST00000209868 554 ntBASIC13.36□□□□□ -0.27
Trim11Q99PQ2 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.36□□□□□ -0.27
Trim11Q99PQ2 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Gm25890-201ENSMUST00000177643 165 ntBASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Gm22614-201ENSMUST00000178300 165 ntBASIC13.35□□□□□ -0.27
Trim11Q99PQ2 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.35□□□□□ -0.27
Trim11Q99PQ2 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Gm43184-201ENSMUST00000197247 542 ntBASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Rps4l-202ENSMUST00000204242 789 ntBASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Gm22042-201ENSMUST00000082989 165 ntBASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Gm26110-201ENSMUST00000083971 165 ntBASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim11Q99PQ2 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms