Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.8□□□□□ -0.2
Hdac9Q99N13 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.8□□□□□ -0.2
Hdac9Q99N13 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Gm4604-201ENSMUST00000025040 390 ntBASIC13.8□□□□□ -0.2
Hdac9Q99N13 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.8□□□□□ -0.2
Hdac9Q99N13 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.8□□□□□ -0.2
Hdac9Q99N13 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.79□□□□□ -0.2
Hdac9Q99N13 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.79□□□□□ -0.2
Hdac9Q99N13 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Hdac9Q99N13 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.79□□□□□ -0.2
Hdac9Q99N13 CT009527.1-201ENSMUST00000224205 339 ntBASIC13.79□□□□□ -0.2
Hdac9Q99N13 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.79□□□□□ -0.2
Hdac9Q99N13 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Gm10263-201ENSMUST00000085163 300 ntBASIC13.79□□□□□ -0.2
Hdac9Q99N13 Gm8325-201ENSMUST00000099086 453 ntBASIC13.79□□□□□ -0.2
Hdac9Q99N13 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.79□□□□□ -0.2
Hdac9Q99N13 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Hdac9Q99N13 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac9Q99N13 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac9Q99N13 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Gm13351-201ENSMUST00000118087 414 ntBASIC13.78□□□□□ -0.2
Hdac9Q99N13 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.78□□□□□ -0.2
Hdac9Q99N13 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Hdac9Q99N13 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms