Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Cdk5rap3Q99LM2 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.15□□□□□ -0.47
Cdk5rap3Q99LM2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Gm14726-201ENSMUST00000120623 896 ntBASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Gm6621-201ENSMUST00000193251 772 ntBASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 AY702102-202ENSMUST00000194651 1173 ntBASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Lect2-202ENSMUST00000225183 823 ntBASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Gm5455-201ENSMUST00000058710 715 ntBASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdk5rap3Q99LM2 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gm12241-201ENSMUST00000118330 726 ntBASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gm17420-201ENSMUST00000164753 153 ntBASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gm27501-201ENSMUST00000183599 107 ntBASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gm45598-202ENSMUST00000210719 986 ntBASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Gzmn-202ENSMUST00000225535 989 ntBASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap3Q99LM2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms