Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Gm26286-201ENSMUST00000104166 134 ntBASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Gm11660-201ENSMUST00000120955 412 ntBASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Gm38341-201ENSMUST00000195357 515 ntBASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Gm44364-201ENSMUST00000198368 141 ntBASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Gm13097-201ENSMUST00000210722 397 ntBASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.34□□□□□ -0.59
Cstf3Q99LI7 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cstf3Q99LI7 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cstf3Q99LI7 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Gm13296-201ENSMUST00000117854 997 ntBASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Gm15004-201ENSMUST00000119192 630 ntBASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Gm11960-201ENSMUST00000122068 925 ntBASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Gm14381-201ENSMUST00000122105 414 ntBASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Gm15276-201ENSMUST00000145953 498 ntBASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.33□□□□□ -0.6
Cstf3Q99LI7 AA914427-201ENSMUST00000193194 1166 ntBASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms