Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.82□□□□□ -0.52
Cdk9Q99J95 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Gm13736-201ENSMUST00000119272 253 ntBASIC11.82□□□□□ -0.52
Cdk9Q99J95 Gm13342-201ENSMUST00000121055 207 ntBASIC11.82□□□□□ -0.52
Cdk9Q99J95 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.82□□□□□ -0.52
Cdk9Q99J95 Gm27514-201ENSMUST00000183692 110 ntBASIC11.82□□□□□ -0.52
Cdk9Q99J95 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Gm39404-201ENSMUST00000216350 313 ntBASIC11.82□□□□□ -0.52
Cdk9Q99J95 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.82□□□□□ -0.52
Cdk9Q99J95 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.82□□□□□ -0.52
Cdk9Q99J95 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk9Q99J95 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.81□□□□□ -0.52
Cdk9Q99J95 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.81□□□□□ -0.52
Cdk9Q99J95 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdk9Q99J95 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.81□□□□□ -0.52
Cdk9Q99J95 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Mir1938-201ENSMUST00000158746 100 ntBASIC11.81□□□□□ -0.52
Cdk9Q99J95 Gm17420-201ENSMUST00000164753 153 ntBASIC11.81□□□□□ -0.52
Cdk9Q99J95 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Cdk9Q99J95 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms