Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Gm23596-201ENSMUST00000104304 132 ntBASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Gm12501-201ENSMUST00000119163 529 ntBASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Gm19287-201ENSMUST00000203190 358 ntBASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdha3Q91Y16 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Gm12196-201ENSMUST00000120954 262 ntBASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Gm18734-201ENSMUST00000172937 808 ntBASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Gm26461-201ENSMUST00000175064 290 ntBASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Gm27552-201ENSMUST00000183351 62 ntBASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Gm27844-201ENSMUST00000183613 62 ntBASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 AU022133-201ENSMUST00000200601 873 ntBASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms