Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Gm14441-201ENSMUST00000121960 540 ntBASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Gm19187-201ENSMUST00000206781 892 ntBASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga11Q91XY8 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.4□□□□□ -0.59
Pcdhga11Q91XY8 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdhga11Q91XY8 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdhga11Q91XY8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.4□□□□□ -0.59
Pcdhga11Q91XY8 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Pcdhga11Q91XY8 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Pcdhga11Q91XY8 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Gm23270-201ENSMUST00000104055 131 ntBASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Gm11511-201ENSMUST00000118146 540 ntBASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Gm14109-201ENSMUST00000118814 309 ntBASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms