Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Gm24891-201ENSMUST00000104391 136 ntBASIC12.25□□□□□ -0.45
Usp3Q91W36 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Mir1192-201ENSMUST00000116976 121 ntBASIC12.25□□□□□ -0.45
Usp3Q91W36 Gm12073-201ENSMUST00000117382 524 ntBASIC12.25□□□□□ -0.45
Usp3Q91W36 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.25□□□□□ -0.45
Usp3Q91W36 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.25□□□□□ -0.45
Usp3Q91W36 Gm8199-201ENSMUST00000121323 823 ntBASIC12.25□□□□□ -0.45
Usp3Q91W36 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.25□□□□□ -0.45
Usp3Q91W36 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.25□□□□□ -0.45
Usp3Q91W36 Gm43138-201ENSMUST00000199123 708 ntBASIC12.25□□□□□ -0.45
Usp3Q91W36 Gm44061-201ENSMUST00000203962 1195 ntBASIC12.25□□□□□ -0.45
Usp3Q91W36 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Gm45074-201ENSMUST00000209091 1240 ntBASIC12.25□□□□□ -0.45
Usp3Q91W36 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.25□□□□□ -0.45
Usp3Q91W36 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.25□□□□□ -0.45
Usp3Q91W36 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Gm25131-201ENSMUST00000082653 151 ntBASIC12.25□□□□□ -0.45
Usp3Q91W36 Gm10288-201ENSMUST00000084614 537 ntBASIC12.25□□□□□ -0.45
Usp3Q91W36 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
Usp3Q91W36 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp3Q91W36 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Usp3Q91W36 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.24□□□□□ -0.45
Usp3Q91W36 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.24□□□□□ -0.45
Usp3Q91W36 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Gm23251-201ENSMUST00000103773 110 ntBASIC12.24□□□□□ -0.45
Usp3Q91W36 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.24□□□□□ -0.45
Usp3Q91W36 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.24□□□□□ -0.45
Usp3Q91W36 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Usp3Q91W36 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.24□□□□□ -0.45
Usp3Q91W36 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Usp3Q91W36 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.24□□□□□ -0.45
Usp3Q91W36 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.24□□□□□ -0.45
Usp3Q91W36 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Gm28359-201ENSMUST00000187470 1322 ntBASIC12.24□□□□□ -0.45
Usp3Q91W36 Gm28766-201ENSMUST00000191086 234 ntBASIC12.24□□□□□ -0.45
Usp3Q91W36 Gm8920-201ENSMUST00000196153 924 ntBASIC12.24□□□□□ -0.45
Usp3Q91W36 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.24□□□□□ -0.45
Usp3Q91W36 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.24□□□□□ -0.45
Usp3Q91W36 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Usp3Q91W36 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.24□□□□□ -0.45
Usp3Q91W36 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.24□□□□□ -0.45
Usp3Q91W36 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Usp3Q91W36 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 AC139323.1-201ENSMUST00000223370 1040 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms