Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.52□□□□□ -0.25
Ddx41Q91VN6 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx41Q91VN6 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx41Q91VN6 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.52□□□□□ -0.25
Ddx41Q91VN6 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx41Q91VN6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx41Q91VN6 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Gm15432-201ENSMUST00000121106 195 ntBASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.51□□□□□ -0.25
Ddx41Q91VN6 AC153961.1-201ENSMUST00000217760 385 ntBASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Ddx41Q91VN6 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Gm14724-201ENSMUST00000118400 537 ntBASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Gm23085-201ENSMUST00000157849 293 ntBASIC13.5□□□□□ -0.25
Ddx41Q91VN6 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Gm8100-201ENSMUST00000182906 988 ntBASIC13.5□□□□□ -0.25
Ddx41Q91VN6 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Gm45770-201ENSMUST00000212105 616 ntBASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Gm1821-202ENSMUST00000227415 750 ntBASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx41Q91VN6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 CT025681.1-201ENSMUST00000225453 1855 ntBASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.49□□□□□ -0.25
Ddx41Q91VN6 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 Gm10051-201ENSMUST00000145209 414 ntBASIC13.49□□□□□ -0.25
Ddx41Q91VN6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.49□□□□□ -0.25
Ddx41Q91VN6 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms