Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh18Q8VHR0 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh18Q8VHR0 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh18Q8VHR0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh18Q8VHR0 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Gm27023-201ENSMUST00000182372 285 ntBASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 AC160340.2-201ENSMUST00000220812 3675 ntBASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh18Q8VHR0 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gm13226-201ENSMUST00000117838 404 ntBASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gm12314-201ENSMUST00000118104 538 ntBASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gm13736-201ENSMUST00000119272 253 ntBASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gm11425-201ENSMUST00000119608 498 ntBASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gm14660-201ENSMUST00000119809 575 ntBASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gm9083-201ENSMUST00000120423 819 ntBASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Mir7085-201ENSMUST00000184353 66 ntBASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gm44958-201ENSMUST00000203734 736 ntBASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gm10076-201ENSMUST00000073238 384 ntBASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gm9396-201ENSMUST00000076703 567 ntBASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh18Q8VHR0 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms