Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Gm9004-201ENSMUST00000218739 1222 ntBASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 AC163667.3-201ENSMUST00000225774 222 ntBASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Auts2-212ENSMUST00000178555 309 ntBASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Gm2546-201ENSMUST00000182630 991 ntBASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Gm38114-201ENSMUST00000191877 1232 ntBASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Gm38230-201ENSMUST00000193572 1159 ntBASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Gm42627-201ENSMUST00000197347 224 ntBASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.53□□□□□ -0.88
Nup35Q8R4R6 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.53□□□□□ -0.88
Nup35Q8R4R6 AC122459.1-201ENSMUST00000228373 885 ntBASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Nup35Q8R4R6 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Nup35Q8R4R6 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Nup35Q8R4R6 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Nup35Q8R4R6 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Nup35Q8R4R6 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Nup35Q8R4R6 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms