Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd109Q8R422 Gm5171-201ENSMUST00000214944 1415 ntBASIC16.49■□□□□ 0.23
Cd109Q8R422 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd109Q8R422 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd109Q8R422 Gm13351-201ENSMUST00000118087 414 ntBASIC16.49■□□□□ 0.23
Cd109Q8R422 Gm13549-201ENSMUST00000118339 796 ntBASIC16.49■□□□□ 0.23
Cd109Q8R422 Gm13284-201ENSMUST00000121020 547 ntBASIC16.49■□□□□ 0.23
Cd109Q8R422 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC16.49■□□□□ 0.23
Cd109Q8R422 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC16.49■□□□□ 0.23
Cd109Q8R422 Gm43671-201ENSMUST00000200422 433 ntBASIC16.49■□□□□ 0.23
Cd109Q8R422 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cd109Q8R422 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC16.49■□□□□ 0.23
Cd109Q8R422 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cd109Q8R422 AC154305.2-201ENSMUST00000225813 901 ntBASIC16.49■□□□□ 0.23
Cd109Q8R422 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cd109Q8R422 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cd109Q8R422 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd109Q8R422 Gm5740-201ENSMUST00000211003 1857 ntBASIC16.49■□□□□ 0.23
Cd109Q8R422 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd109Q8R422 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC16.49■□□□□ 0.23
Cd109Q8R422 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cd109Q8R422 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd109Q8R422 CT025624.1-201ENSMUST00000224007 2700 ntBASIC16.49■□□□□ 0.23
Cd109Q8R422 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd109Q8R422 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC16.49■□□□□ 0.23
Cd109Q8R422 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd109Q8R422 Gm37122-201ENSMUST00000195313 1567 ntBASIC16.49■□□□□ 0.23
Cd109Q8R422 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cd109Q8R422 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd109Q8R422 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd109Q8R422 Gm44056-201ENSMUST00000204623 1427 ntBASIC16.48■□□□□ 0.23
Cd109Q8R422 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd109Q8R422 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd109Q8R422 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd109Q8R422 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cd109Q8R422 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd109Q8R422 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC16.48■□□□□ 0.23
Cd109Q8R422 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC16.48■□□□□ 0.23
Cd109Q8R422 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cd109Q8R422 Gm26982-201ENSMUST00000182250 1151 ntBASIC16.48■□□□□ 0.23
Cd109Q8R422 Gm18706-201ENSMUST00000210053 1066 ntBASIC16.48■□□□□ 0.23
Cd109Q8R422 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cd109Q8R422 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd109Q8R422 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cd109Q8R422 Gm38194-201ENSMUST00000194529 2211 ntBASIC16.48■□□□□ 0.23
Cd109Q8R422 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cd109Q8R422 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cd109Q8R422 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd109Q8R422 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cd109Q8R422 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd109Q8R422 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Cd109Q8R422 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd109Q8R422 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cd109Q8R422 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC16.47■□□□□ 0.23
Cd109Q8R422 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd109Q8R422 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd109Q8R422 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC16.47■□□□□ 0.23
Cd109Q8R422 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cd109Q8R422 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cd109Q8R422 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC16.47■□□□□ 0.23
Cd109Q8R422 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC16.47■□□□□ 0.23
Cd109Q8R422 Gm9369-201ENSMUST00000196009 733 ntBASIC16.47■□□□□ 0.23
Cd109Q8R422 Gm42655-201ENSMUST00000202782 1134 ntBASIC16.47■□□□□ 0.23
Cd109Q8R422 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Cd109Q8R422 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cd109Q8R422 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cd109Q8R422 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd109Q8R422 Gm28424-201ENSMUST00000187393 1319 ntBASIC16.47■□□□□ 0.23
Cd109Q8R422 Gm43365-201ENSMUST00000196522 2106 ntBASIC16.47■□□□□ 0.23
Cd109Q8R422 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cd109Q8R422 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd109Q8R422 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cd109Q8R422 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cd109Q8R422 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd109Q8R422 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd109Q8R422 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd109Q8R422 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd109Q8R422 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cd109Q8R422 Gm11560-201ENSMUST00000117567 948 ntBASIC16.46■□□□□ 0.23
Cd109Q8R422 Olfml3-204ENSMUST00000169286 874 ntBASIC16.46■□□□□ 0.23
Cd109Q8R422 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC16.46■□□□□ 0.23
Cd109Q8R422 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd109Q8R422 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC16.46■□□□□ 0.23
Cd109Q8R422 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd109Q8R422 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd109Q8R422 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cd109Q8R422 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC16.46■□□□□ 0.23
Cd109Q8R422 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd109Q8R422 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd109Q8R422 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Cd109Q8R422 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd109Q8R422 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd109Q8R422 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd109Q8R422 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cd109Q8R422 AC155298.2-201ENSMUST00000225485 6226 ntBASIC16.46■□□□□ 0.23
Cd109Q8R422 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Cd109Q8R422 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
Cd109Q8R422 CT010447.1-201ENSMUST00000225657 1608 ntBASIC16.46■□□□□ 0.22
Cd109Q8R422 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd109Q8R422 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms