Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim29Q8R2Q0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim29Q8R2Q0 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim29Q8R2Q0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim29Q8R2Q0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trim29Q8R2Q0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim29Q8R2Q0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trim29Q8R2Q0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trim29Q8R2Q0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.4□□□□□ -0.27
Trim29Q8R2Q0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Gm11960-201ENSMUST00000122068 925 ntBASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Gm24749-201ENSMUST00000157838 343 ntBASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.39□□□□□ -0.27
Trim29Q8R2Q0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim29Q8R2Q0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim29Q8R2Q0 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim29Q8R2Q0 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim29Q8R2Q0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim29Q8R2Q0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trim29Q8R2Q0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim29Q8R2Q0 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms