Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.06□□□□□ -0.64
Clrn1Q8K445 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.06□□□□□ -0.64
Clrn1Q8K445 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Gm23596-201ENSMUST00000104304 132 ntBASIC11.06□□□□□ -0.64
Clrn1Q8K445 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.06□□□□□ -0.64
Clrn1Q8K445 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.06□□□□□ -0.64
Clrn1Q8K445 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.06□□□□□ -0.64
Clrn1Q8K445 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.06□□□□□ -0.64
Clrn1Q8K445 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clrn1Q8K445 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Gm11439-201ENSMUST00000118598 409 ntBASIC11.05□□□□□ -0.64
Clrn1Q8K445 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Gm3332-201ENSMUST00000189337 928 ntBASIC11.05□□□□□ -0.64
Clrn1Q8K445 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Gm18056-201ENSMUST00000207670 568 ntBASIC11.05□□□□□ -0.64
Clrn1Q8K445 Gm18061-201ENSMUST00000208350 562 ntBASIC11.05□□□□□ -0.64
Clrn1Q8K445 Gm18063-201ENSMUST00000208529 568 ntBASIC11.05□□□□□ -0.64
Clrn1Q8K445 Gm18052-201ENSMUST00000208750 559 ntBASIC11.05□□□□□ -0.64
Clrn1Q8K445 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.05□□□□□ -0.64
Clrn1Q8K445 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms