Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm8815-201ENSMUST00000173809 620 ntBASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Gm4482-201ENSMUST00000200876 742 ntBASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Gm6867-201ENSMUST00000219165 425 ntBASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Brf1Q8CFK2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Brf1Q8CFK2 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Gm11783-201ENSMUST00000119549 885 ntBASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Mir8093-201ENSMUST00000185043 137 ntBASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Brf1Q8CFK2 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Brf1Q8CFK2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf1Q8CFK2 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Brf1Q8CFK2 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf1Q8CFK2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Brf1Q8CFK2 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms