Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Mir877-201ENSMUST00000104738 85 ntBASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Gm11930-201ENSMUST00000117788 190 ntBASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Gm6114-201ENSMUST00000182472 968 ntBASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Gm3096-201ENSMUST00000185770 364 ntBASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Gm9996-201ENSMUST00000070359 913 ntBASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc87Q8CDL9 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Gm27046-201ENSMUST00000182160 463 ntBASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Gm4857-201ENSMUST00000192718 785 ntBASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms