Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Gm25890-201ENSMUST00000177643 165 ntBASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Gm22614-201ENSMUST00000178300 165 ntBASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Gm22042-201ENSMUST00000082989 165 ntBASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Gm26110-201ENSMUST00000083971 165 ntBASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Erich3-203ENSMUST00000189969 3460 ntBASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Gm11700-201ENSMUST00000119409 403 ntBASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 B9d1os-201ENSMUST00000137010 674 ntBASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Gm6114-201ENSMUST00000182472 968 ntBASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Gm45598-202ENSMUST00000210719 986 ntBASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Gm19208-201ENSMUST00000213861 912 ntBASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vcpip1Q8CDG3 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcpip1Q8CDG3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms