Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Gm11941-201ENSMUST00000119904 610 ntBASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Gm13263-201ENSMUST00000121271 838 ntBASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Gm13916-201ENSMUST00000117368 628 ntBASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Gm15595-201ENSMUST00000120840 961 ntBASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Gm38151-201ENSMUST00000195085 289 ntBASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Gm9555-201ENSMUST00000200908 583 ntBASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Gm1821-202ENSMUST00000227415 750 ntBASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Ntng1-201ENSMUST00000051253 327 ntBASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc60Q8C4J0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 B9d1os-201ENSMUST00000137010 674 ntBASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Gm16570-201ENSMUST00000161951 436 ntBASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccdc60Q8C4J0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms