Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Smg1Q8BKX6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smg1Q8BKX6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Gm5178-201ENSMUST00000219380 898 ntBASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Gm15197-201ENSMUST00000120526 478 ntBASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 H2afy3-201ENSMUST00000151919 1112 ntBASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 n-R5s130-201ENSMUST00000178128 119 ntBASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Gm24312-201ENSMUST00000178677 119 ntBASIC9.62□□□□□ -0.87
Smg1Q8BKX6 n-R5s106-201ENSMUST00000179060 119 ntBASIC9.62□□□□□ -0.87
Smg1Q8BKX6 n-R5s118-201ENSMUST00000179887 119 ntBASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Gm7815-201ENSMUST00000196104 832 ntBASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Gm44917-201ENSMUST00000208798 520 ntBASIC9.62□□□□□ -0.87
Smg1Q8BKX6 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Gm4778-201ENSMUST00000098878 1098 ntBASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Gm44882-201ENSMUST00000205702 802 ntBASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.62□□□□□ -0.87
Smg1Q8BKX6 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Gm25591-201ENSMUST00000177317 94 ntBASIC9.61□□□□□ -0.87
Smg1Q8BKX6 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Gm27149-201ENSMUST00000184716 1266 ntBASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Gm5254-201ENSMUST00000188353 977 ntBASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Gm43564-201ENSMUST00000196185 211 ntBASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Gm14524-201ENSMUST00000121066 683 ntBASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Gm43811-201ENSMUST00000202862 695 ntBASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.61□□□□□ -0.87
Smg1Q8BKX6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms