Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Gm11989-201ENSMUST00000117240 672 ntBASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Gm11362-201ENSMUST00000118838 850 ntBASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Gm29396-201ENSMUST00000185659 716 ntBASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Gm18187-201ENSMUST00000196476 984 ntBASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Chmp2bQ8BJF9 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Gm15370-201ENSMUST00000117158 253 ntBASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.01□□□□□ -0.49
Chmp2bQ8BJF9 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Gm37969-201ENSMUST00000195777 3409 ntBASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Gm26956-201ENSMUST00000182176 986 ntBASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Gm6114-201ENSMUST00000182472 968 ntBASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Gm37424-201ENSMUST00000191727 561 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms