Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Gm38266-201ENSMUST00000194931 421 ntBASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Gm45331-201ENSMUST00000209868 554 ntBASIC11.35□□□□□ -0.59
Rnf38Q8BI21 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.35□□□□□ -0.59
Rnf38Q8BI21 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Lect2-202ENSMUST00000225183 823 ntBASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Gm10254-201ENSMUST00000052888 867 ntBASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Gm8420-201ENSMUST00000097103 598 ntBASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 BC043934-202ENSMUST00000185694 2356 ntBASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Gm11222-201ENSMUST00000119005 738 ntBASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Gm11960-201ENSMUST00000122068 925 ntBASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Mir8109-201ENSMUST00000184375 117 ntBASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Gm6621-201ENSMUST00000193251 772 ntBASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf38Q8BI21 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Rnf38Q8BI21 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rnf38Q8BI21 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rnf38Q8BI21 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms