Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Ttc28Q80XJ3 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ttc28Q80XJ3 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ttc28Q80XJ3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ttc28Q80XJ3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
Ttc28Q80XJ3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ttc28Q80XJ3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ttc28Q80XJ3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ttc28Q80XJ3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ttc28Q80XJ3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ttc28Q80XJ3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ttc28Q80XJ3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Ttc28Q80XJ3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ttc28Q80XJ3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ttc28Q80XJ3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ttc28Q80XJ3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Gm25492-201ENSMUST00000157383 129 ntBASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Gm43997-201ENSMUST00000203986 1005 ntBASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Gm2345-201ENSMUST00000193451 589 ntBASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Gm5468-202ENSMUST00000227851 682 ntBASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ttc28Q80XJ3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Gm25830-201ENSMUST00000158923 132 ntBASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Gm37782-201ENSMUST00000194879 678 ntBASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Gm2594-201ENSMUST00000214774 742 ntBASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 AC162932.1-201ENSMUST00000219209 872 ntBASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms