Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Gm14892-201ENSMUST00000117636 267 ntBASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Gm26047-201ENSMUST00000157308 113 ntBASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Gm6114-201ENSMUST00000182472 968 ntBASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Gm26047-202ENSMUST00000198840 115 ntBASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Usp6nlQ80XC3 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm11801-201ENSMUST00000117807 746 ntBASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm12030-201ENSMUST00000121917 223 ntBASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm37826-201ENSMUST00000195329 322 ntBASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm7504-201ENSMUST00000201449 424 ntBASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm44124-201ENSMUST00000204159 472 ntBASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp6nlQ80XC3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.96□□□□□ -0.34
Usp6nlQ80XC3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.96□□□□□ -0.34
Usp6nlQ80XC3 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usp6nlQ80XC3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usp6nlQ80XC3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usp6nlQ80XC3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usp6nlQ80XC3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usp6nlQ80XC3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms