Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm38233-201ENSMUST00000194259 807 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm42821-201ENSMUST00000199771 489 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm4778-201ENSMUST00000098878 1098 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC9.95□□□□□ -0.82
Rif1Q6PR54 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm38246-201ENSMUST00000194318 1511 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm14165-201ENSMUST00000121456 952 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm16030-201ENSMUST00000159098 603 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm17782-201ENSMUST00000174345 880 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm25735-201ENSMUST00000175164 215 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm18621-201ENSMUST00000222677 679 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm5989-201ENSMUST00000096092 2077 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gm4705-201ENSMUST00000177415 354 ntBASIC9.94□□□□□ -0.82
Rif1Q6PR54 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gm3945-201ENSMUST00000196637 683 ntBASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 AC117769.1-201ENSMUST00000224716 1120 ntBASIC9.94□□□□□ -0.82
Rif1Q6PR54 AC163646.3-201ENSMUST00000228879 772 ntBASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gm43677-201ENSMUST00000198098 2378 ntBASIC9.94□□□□□ -0.82
Rif1Q6PR54 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gm21451-201ENSMUST00000111062 2775 ntBASIC9.94□□□□□ -0.82
Rif1Q6PR54 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gm12499-201ENSMUST00000121961 546 ntBASIC9.94□□□□□ -0.82
Rif1Q6PR54 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC9.94□□□□□ -0.82
Rif1Q6PR54 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.94□□□□□ -0.82
Rif1Q6PR54 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gm25872-201ENSMUST00000177784 100 ntBASIC9.94□□□□□ -0.82
Rif1Q6PR54 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gm8574-201ENSMUST00000203207 924 ntBASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gm6518-201ENSMUST00000208450 342 ntBASIC9.94□□□□□ -0.82
Rif1Q6PR54 Gm18035-201ENSMUST00000211962 589 ntBASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms