Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 AC073947.1-201ENSMUST00000216991 649 ntBASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Gm19163-201ENSMUST00000223313 780 ntBASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf220Q6PDX6 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Gm8652-201ENSMUST00000181363 964 ntBASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Gm29705-201ENSMUST00000212598 474 ntBASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Gm24526-201ENSMUST00000082921 158 ntBASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms