Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Gm13700-201ENSMUST00000118624 1128 ntBASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Gm1826-201ENSMUST00000118646 1162 ntBASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 CT030166.5-201ENSMUST00000222249 420 ntBASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slx4Q6P1D7 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Slx4Q6P1D7 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC17.77■□□□□ 0.43
Slx4Q6P1D7 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Slx4Q6P1D7 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slx4Q6P1D7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Slx4Q6P1D7 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Slx4Q6P1D7 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Slx4Q6P1D7 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Gm15625-201ENSMUST00000117617 1093 ntBASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Gm14113-201ENSMUST00000121399 976 ntBASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Gm25872-201ENSMUST00000177784 100 ntBASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Gm9625-201ENSMUST00000180422 955 ntBASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Gm5342-201ENSMUST00000181982 1003 ntBASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Mir6973a-201ENSMUST00000183646 78 ntBASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Gm45310-201ENSMUST00000210436 275 ntBASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC17.76■□□□□ 0.43
Slx4Q6P1D7 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slx4Q6P1D7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Gm37651-201ENSMUST00000194679 1494 ntBASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Gm42660-201ENSMUST00000197733 947 ntBASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Gm42432-201ENSMUST00000197902 1617 ntBASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 AC122891.1-201ENSMUST00000218671 268 ntBASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Gm18065-201ENSMUST00000221395 526 ntBASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Gm7841-201ENSMUST00000122108 1629 ntBASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slx4Q6P1D7 Gm23604-201ENSMUST00000104311 132 ntBASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms