Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Gm18198-201ENSMUST00000204986 1551 ntBASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Cog3-203ENSMUST00000227473 4197 ntBASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Gm25880-201ENSMUST00000104331 132 ntBASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Gm22711-201ENSMUST00000116890 133 ntBASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Gm9136-201ENSMUST00000193368 454 ntBASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Gm44329-201ENSMUST00000197469 112 ntBASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 AC124457.1-201ENSMUST00000198845 120 ntBASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdzrn3Q69ZS0 Rubie-203ENSMUST00000227803 2430 ntBASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Gm11836-201ENSMUST00000121022 441 ntBASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Mir1956-201ENSMUST00000157748 65 ntBASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Gm10731-201ENSMUST00000181171 448 ntBASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Gm3793-201ENSMUST00000204973 672 ntBASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.37□□□□□ -0.11
Pdzrn3Q69ZS0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdzrn3Q69ZS0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms