Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC10.68□□□□□ -0.7
VcanQ62059 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC10.68□□□□□ -0.7
VcanQ62059 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
VcanQ62059 Gm44173-201ENSMUST00000204316 132 ntBASIC10.68□□□□□ -0.7
VcanQ62059 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC10.68□□□□□ -0.7
VcanQ62059 AL844586.1-201ENSMUST00000224297 1042 ntBASIC10.68□□□□□ -0.7
VcanQ62059 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
VcanQ62059 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
VcanQ62059 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.68□□□□□ -0.7
VcanQ62059 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.68□□□□□ -0.7
VcanQ62059 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
VcanQ62059 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.68□□□□□ -0.7
VcanQ62059 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
VcanQ62059 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.67□□□□□ -0.7
VcanQ62059 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.67□□□□□ -0.7
VcanQ62059 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Gm16184-201ENSMUST00000162324 573 ntBASIC10.67□□□□□ -0.7
VcanQ62059 Gm17931-201ENSMUST00000208132 634 ntBASIC10.67□□□□□ -0.7
VcanQ62059 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.67□□□□□ -0.7
VcanQ62059 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
VcanQ62059 Mir874-201ENSMUST00000104769 76 ntBASIC10.67□□□□□ -0.7
VcanQ62059 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC10.67□□□□□ -0.7
VcanQ62059 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC10.67□□□□□ -0.7
VcanQ62059 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
VcanQ62059 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.67□□□□□ -0.7
VcanQ62059 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
VcanQ62059 Gm17836-201ENSMUST00000191976 1302 ntBASIC10.67□□□□□ -0.7
VcanQ62059 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.67□□□□□ -0.7
VcanQ62059 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VcanQ62059 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.67□□□□□ -0.7
VcanQ62059 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
VcanQ62059 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC10.66□□□□□ -0.7
VcanQ62059 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC10.66□□□□□ -0.7
VcanQ62059 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
VcanQ62059 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC10.66□□□□□ -0.7
VcanQ62059 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC10.66□□□□□ -0.7
VcanQ62059 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 AC163646.3-201ENSMUST00000228879 772 ntBASIC10.66□□□□□ -0.7
VcanQ62059 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
VcanQ62059 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.66□□□□□ -0.7
VcanQ62059 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
VcanQ62059 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Gm12028-201ENSMUST00000118065 436 ntBASIC10.66□□□□□ -0.7
VcanQ62059 Atad3aos-204ENSMUST00000174185 482 ntTSL 3 BASIC10.66□□□□□ -0.7
VcanQ62059 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
VcanQ62059 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
VcanQ62059 AC133496.1-201ENSMUST00000223891 743 ntBASIC10.66□□□□□ -0.7
VcanQ62059 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
VcanQ62059 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VcanQ62059 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms