Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm9550-201ENSMUST00000161130 862 ntBASIC13.87□□□□□ -0.19
Ctr9Q62018 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.87□□□□□ -0.19
Ctr9Q62018 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Ctr9Q62018 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ctr9Q62018 Gm7940-201ENSMUST00000218195 769 ntBASIC13.87□□□□□ -0.19
Ctr9Q62018 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.87□□□□□ -0.19
Ctr9Q62018 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.87□□□□□ -0.19
Ctr9Q62018 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ctr9Q62018 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.87□□□□□ -0.19
Ctr9Q62018 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Ctr9Q62018 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ctr9Q62018 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.87□□□□□ -0.19
Ctr9Q62018 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.87□□□□□ -0.19
Ctr9Q62018 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ctr9Q62018 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
Ctr9Q62018 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ctr9Q62018 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ctr9Q62018 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.86□□□□□ -0.19
Ctr9Q62018 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ctr9Q62018 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ctr9Q62018 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Gm11783-201ENSMUST00000119549 885 ntBASIC13.86□□□□□ -0.19
Ctr9Q62018 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.86□□□□□ -0.19
Ctr9Q62018 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.86□□□□□ -0.19
Ctr9Q62018 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.86□□□□□ -0.19
Ctr9Q62018 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.86□□□□□ -0.19
Ctr9Q62018 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.86□□□□□ -0.19
Ctr9Q62018 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.86□□□□□ -0.19
Ctr9Q62018 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.86□□□□□ -0.19
Ctr9Q62018 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Gm45770-201ENSMUST00000212105 616 ntBASIC13.86□□□□□ -0.19
Ctr9Q62018 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.86□□□□□ -0.19
Ctr9Q62018 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.86□□□□□ -0.19
Ctr9Q62018 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ctr9Q62018 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ctr9Q62018 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ctr9Q62018 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ctr9Q62018 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctr9Q62018 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ctr9Q62018 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ctr9Q62018 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ctr9Q62018 Gm15573-201ENSMUST00000119487 540 ntBASIC13.85□□□□□ -0.19
Ctr9Q62018 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.85□□□□□ -0.19
Ctr9Q62018 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.85□□□□□ -0.19
Ctr9Q62018 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 Gm29499-201ENSMUST00000189151 486 ntBASIC13.85□□□□□ -0.19
Ctr9Q62018 Gm28329-201ENSMUST00000191208 689 ntBASIC13.85□□□□□ -0.19
Ctr9Q62018 Gm29171-201ENSMUST00000191397 486 ntBASIC13.85□□□□□ -0.19
Ctr9Q62018 Gm38151-201ENSMUST00000195085 289 ntBASIC13.85□□□□□ -0.19
Ctr9Q62018 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.85□□□□□ -0.19
Ctr9Q62018 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ctr9Q62018 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ctr9Q62018 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.85□□□□□ -0.19
Ctr9Q62018 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Ctr9Q62018 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.85□□□□□ -0.19
Ctr9Q62018 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctr9Q62018 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms