Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Six4Q61321 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.81□□□□□ -0.52
Six4Q61321 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Six4Q61321 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.81□□□□□ -0.52
Six4Q61321 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Six4Q61321 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Six4Q61321 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.81□□□□□ -0.52
Six4Q61321 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.81□□□□□ -0.52
Six4Q61321 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.81□□□□□ -0.52
Six4Q61321 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.81□□□□□ -0.52
Six4Q61321 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.81□□□□□ -0.52
Six4Q61321 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Six4Q61321 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.81□□□□□ -0.52
Six4Q61321 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.81□□□□□ -0.52
Six4Q61321 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Six4Q61321 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.81□□□□□ -0.52
Six4Q61321 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.81□□□□□ -0.52
Six4Q61321 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Six4Q61321 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Six4Q61321 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.81□□□□□ -0.52
Six4Q61321 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Six4Q61321 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Erich3-203ENSMUST00000189969 3460 ntBASIC11.81□□□□□ -0.52
Six4Q61321 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Six4Q61321 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Six4Q61321 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Six4Q61321 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.8□□□□□ -0.52
Six4Q61321 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.8□□□□□ -0.52
Six4Q61321 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Six4Q61321 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Six4Q61321 Gm14071-201ENSMUST00000117817 509 ntBASIC11.8□□□□□ -0.52
Six4Q61321 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.8□□□□□ -0.52
Six4Q61321 Gm15566-201ENSMUST00000121130 590 ntBASIC11.8□□□□□ -0.52
Six4Q61321 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.8□□□□□ -0.52
Six4Q61321 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.8□□□□□ -0.52
Six4Q61321 Gm19353-201ENSMUST00000184561 445 ntBASIC11.8□□□□□ -0.52
Six4Q61321 Gm37835-201ENSMUST00000193305 361 ntBASIC11.8□□□□□ -0.52
Six4Q61321 Gm43002-201ENSMUST00000200310 155 ntBASIC11.8□□□□□ -0.52
Six4Q61321 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.8□□□□□ -0.52
Six4Q61321 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Six4Q61321 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Six4Q61321 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Six4Q61321 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Six4Q61321 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.8□□□□□ -0.52
Six4Q61321 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Six4Q61321 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six4Q61321 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.8□□□□□ -0.52
Six4Q61321 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six4Q61321 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six4Q61321 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.79□□□□□ -0.52
Six4Q61321 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Six4Q61321 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Six4Q61321 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 128.1 ms