Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm7003-201ENSMUST00000195089 312 ntBASIC11.29□□□□□ -0.6
ClpbQ60649 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.29□□□□□ -0.6
ClpbQ60649 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.29□□□□□ -0.6
ClpbQ60649 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.29□□□□□ -0.6
ClpbQ60649 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.29□□□□□ -0.6
ClpbQ60649 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.29□□□□□ -0.6
ClpbQ60649 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
ClpbQ60649 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
ClpbQ60649 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ClpbQ60649 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.29□□□□□ -0.6
ClpbQ60649 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.29□□□□□ -0.6
ClpbQ60649 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ClpbQ60649 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.29□□□□□ -0.6
ClpbQ60649 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.29□□□□□ -0.6
ClpbQ60649 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
ClpbQ60649 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.28□□□□□ -0.6
ClpbQ60649 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.28□□□□□ -0.6
ClpbQ60649 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
ClpbQ60649 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
ClpbQ60649 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
ClpbQ60649 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.28□□□□□ -0.6
ClpbQ60649 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.28□□□□□ -0.6
ClpbQ60649 Gm11511-201ENSMUST00000118146 540 ntBASIC11.28□□□□□ -0.6
ClpbQ60649 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
ClpbQ60649 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.28□□□□□ -0.6
ClpbQ60649 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.28□□□□□ -0.6
ClpbQ60649 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
ClpbQ60649 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
ClpbQ60649 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.28□□□□□ -0.6
ClpbQ60649 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.28□□□□□ -0.6
ClpbQ60649 Gm43184-201ENSMUST00000197247 542 ntBASIC11.28□□□□□ -0.6
ClpbQ60649 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.28□□□□□ -0.6
ClpbQ60649 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
ClpbQ60649 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.28□□□□□ -0.6
ClpbQ60649 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
ClpbQ60649 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.28□□□□□ -0.6
ClpbQ60649 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
ClpbQ60649 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
ClpbQ60649 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpbQ60649 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.28□□□□□ -0.6
ClpbQ60649 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
ClpbQ60649 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ClpbQ60649 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
ClpbQ60649 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
ClpbQ60649 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
ClpbQ60649 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.27□□□□□ -0.6
ClpbQ60649 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
ClpbQ60649 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.27□□□□□ -0.6
ClpbQ60649 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.27□□□□□ -0.6
ClpbQ60649 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ClpbQ60649 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.27□□□□□ -0.61
ClpbQ60649 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.27□□□□□ -0.61
ClpbQ60649 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.27□□□□□ -0.61
ClpbQ60649 Gm15610-201ENSMUST00000120584 195 ntBASIC11.27□□□□□ -0.61
ClpbQ60649 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.27□□□□□ -0.61
ClpbQ60649 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.27□□□□□ -0.61
ClpbQ60649 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
ClpbQ60649 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms