Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.19□□□□□ -0.62
Nr1h4Q60641 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
Nr1h4Q60641 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.19□□□□□ -0.62
Nr1h4Q60641 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.19□□□□□ -0.62
Nr1h4Q60641 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.19□□□□□ -0.62
Nr1h4Q60641 Gm24845-201ENSMUST00000158034 109 ntBASIC11.19□□□□□ -0.62
Nr1h4Q60641 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.19□□□□□ -0.62
Nr1h4Q60641 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.19□□□□□ -0.62
Nr1h4Q60641 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.19□□□□□ -0.62
Nr1h4Q60641 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.19□□□□□ -0.62
Nr1h4Q60641 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.19□□□□□ -0.62
Nr1h4Q60641 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Gm42571-201ENSMUST00000201197 2464 ntBASIC11.18□□□□□ -0.62
Nr1h4Q60641 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.18□□□□□ -0.62
Nr1h4Q60641 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.18□□□□□ -0.62
Nr1h4Q60641 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.18□□□□□ -0.62
Nr1h4Q60641 Gm12164-201ENSMUST00000121695 551 ntBASIC11.18□□□□□ -0.62
Nr1h4Q60641 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.18□□□□□ -0.62
Nr1h4Q60641 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.18□□□□□ -0.62
Nr1h4Q60641 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Gm45784-201ENSMUST00000188360 142 ntBASIC11.18□□□□□ -0.62
Nr1h4Q60641 Gm6266-201ENSMUST00000203844 806 ntBASIC11.18□□□□□ -0.62
Nr1h4Q60641 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.18□□□□□ -0.62
Nr1h4Q60641 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.18□□□□□ -0.62
Nr1h4Q60641 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nr1h4Q60641 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.17□□□□□ -0.62
Nr1h4Q60641 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.17□□□□□ -0.62
Nr1h4Q60641 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.17□□□□□ -0.62
Nr1h4Q60641 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms