Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.69□□□□□ -0.22
Prdm1Q60636 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Erich3-203ENSMUST00000189969 3460 ntBASIC13.69□□□□□ -0.22
Prdm1Q60636 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.69□□□□□ -0.22
Prdm1Q60636 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Prdm1Q60636 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.69□□□□□ -0.22
Prdm1Q60636 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.69□□□□□ -0.22
Prdm1Q60636 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.68□□□□□ -0.22
Prdm1Q60636 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Prdm1Q60636 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.68□□□□□ -0.22
Prdm1Q60636 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.68□□□□□ -0.22
Prdm1Q60636 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Gm13809-201ENSMUST00000117921 597 ntBASIC13.68□□□□□ -0.22
Prdm1Q60636 Gm11941-201ENSMUST00000119904 610 ntBASIC13.68□□□□□ -0.22
Prdm1Q60636 Gm13263-201ENSMUST00000121271 838 ntBASIC13.68□□□□□ -0.22
Prdm1Q60636 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.68□□□□□ -0.22
Prdm1Q60636 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Prdm1Q60636 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.68□□□□□ -0.22
Prdm1Q60636 Gm38151-201ENSMUST00000195085 289 ntBASIC13.68□□□□□ -0.22
Prdm1Q60636 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.68□□□□□ -0.22
Prdm1Q60636 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Prdm1Q60636 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.68□□□□□ -0.22
Prdm1Q60636 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.68□□□□□ -0.22
Prdm1Q60636 Spcs1-203ENSMUST00000226374 592 ntBASIC13.68□□□□□ -0.22
Prdm1Q60636 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.68□□□□□ -0.22
Prdm1Q60636 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Prdm1Q60636 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Prdm1Q60636 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Prdm1Q60636 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.68□□□□□ -0.22
Prdm1Q60636 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prdm1Q60636 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.68□□□□□ -0.22
Prdm1Q60636 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Prdm1Q60636 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.67□□□□□ -0.22
Prdm1Q60636 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.67□□□□□ -0.22
Prdm1Q60636 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.67□□□□□ -0.22
Prdm1Q60636 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Prdm1Q60636 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Prdm1Q60636 Gm13916-201ENSMUST00000117368 628 ntBASIC13.67□□□□□ -0.22
Prdm1Q60636 Gm8731-201ENSMUST00000118088 412 ntBASIC13.67□□□□□ -0.22
Prdm1Q60636 Gm15566-201ENSMUST00000121130 590 ntBASIC13.67□□□□□ -0.22
Prdm1Q60636 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.67□□□□□ -0.22
Prdm1Q60636 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.67□□□□□ -0.22
Prdm1Q60636 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.67□□□□□ -0.22
Prdm1Q60636 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Prdm1Q60636 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Prdm1Q60636 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.67□□□□□ -0.22
Prdm1Q60636 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prdm1Q60636 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.67□□□□□ -0.22
Prdm1Q60636 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.66□□□□□ -0.22
Prdm1Q60636 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Prdm1Q60636 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms