Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Gm8913-201ENSMUST00000209491 641 ntBASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Gm6082-201ENSMUST00000215204 454 ntBASIC12.19□□□□□ -0.46
Trim38Q5SZ99 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Gm8420-201ENSMUST00000097103 598 ntBASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Gm14130-201ENSMUST00000118417 987 ntBASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.18□□□□□ -0.46
Trim38Q5SZ99 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim38Q5SZ99 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Mir7677-201ENSMUST00000184226 67 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm28937-201ENSMUST00000185413 695 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm29400-201ENSMUST00000187208 695 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm28662-201ENSMUST00000188446 695 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm28251-201ENSMUST00000188835 695 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm37318-201ENSMUST00000194325 695 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm38117-201ENSMUST00000194653 939 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm38017-201ENSMUST00000194768 695 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm37287-201ENSMUST00000195449 695 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm37793-201ENSMUST00000195548 695 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm18038-201ENSMUST00000197900 485 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm6450-201ENSMUST00000200896 574 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms