Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.02□□□□□ -0.32
Ccdc85aQ5SP85 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc85aQ5SP85 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc85aQ5SP85 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc85aQ5SP85 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc85aQ5SP85 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc85aQ5SP85 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc85aQ5SP85 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc85aQ5SP85 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc85aQ5SP85 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Gm11619-201ENSMUST00000117474 237 ntBASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Gm28937-201ENSMUST00000185413 695 ntBASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Gm29400-201ENSMUST00000187208 695 ntBASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Gm28662-201ENSMUST00000188446 695 ntBASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Gm28251-201ENSMUST00000188835 695 ntBASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Gm37318-201ENSMUST00000194325 695 ntBASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Gm38017-201ENSMUST00000194768 695 ntBASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Gm37287-201ENSMUST00000195449 695 ntBASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Gm37793-201ENSMUST00000195548 695 ntBASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc85aQ5SP85 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Gm14274-201ENSMUST00000117182 615 ntBASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Gm12218-201ENSMUST00000117666 399 ntBASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Gm15003-201ENSMUST00000118884 446 ntBASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Gm7504-201ENSMUST00000201449 424 ntBASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc85aQ5SP85 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms