Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Gm14277-201ENSMUST00000121195 360 ntBASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Gm8956-201ENSMUST00000203939 825 ntBASIC12.47□□□□□ -0.41
Syne3Q4FZC9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Gm4607-201ENSMUST00000206649 577 ntBASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Gm17827-201ENSMUST00000211825 742 ntBASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Syne3Q4FZC9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.47□□□□□ -0.41
Syne3Q4FZC9 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Gm15236-201ENSMUST00000117309 379 ntBASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Gm5419-201ENSMUST00000119301 527 ntBASIC12.46□□□□□ -0.41
Syne3Q4FZC9 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Gm2260-201ENSMUST00000184965 657 ntBASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Gm29199-201ENSMUST00000187766 775 ntBASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Syne3Q4FZC9 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.46□□□□□ -0.41
Syne3Q4FZC9 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.46□□□□□ -0.42
Syne3Q4FZC9 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Syne3Q4FZC9 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Syne3Q4FZC9 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Syne3Q4FZC9 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Syne3Q4FZC9 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Syne3Q4FZC9 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Syne3Q4FZC9 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Syne3Q4FZC9 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.45□□□□□ -0.42
Syne3Q4FZC9 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.45□□□□□ -0.42
Syne3Q4FZC9 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Syne3Q4FZC9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Syne3Q4FZC9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Syne3Q4FZC9 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms