Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Gm12165-201ENSMUST00000117047 342 ntBASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Gm37835-201ENSMUST00000193305 361 ntBASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Gm38151-201ENSMUST00000195085 289 ntBASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Spcs1-203ENSMUST00000226374 592 ntBASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nlrc4Q3UP24 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gm13916-201ENSMUST00000117368 628 ntBASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gm8731-201ENSMUST00000118088 412 ntBASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gm20426-201ENSMUST00000173657 440 ntBASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nlrc4Q3UP24 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nlrc4Q3UP24 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.35□□□□□ -0.43
Nlrc4Q3UP24 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Nlrc4Q3UP24 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nlrc4Q3UP24 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nlrc4Q3UP24 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nlrc4Q3UP24 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.35□□□□□ -0.43
Nlrc4Q3UP24 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.35□□□□□ -0.43
Nlrc4Q3UP24 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nlrc4Q3UP24 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nlrc4Q3UP24 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.35□□□□□ -0.43
Nlrc4Q3UP24 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.35□□□□□ -0.43
Nlrc4Q3UP24 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.35□□□□□ -0.43
Nlrc4Q3UP24 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.35□□□□□ -0.43
Nlrc4Q3UP24 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms