Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Gm25076-201ENSMUST00000104098 132 ntBASIC11.82□□□□□ -0.52
Usp30Q3UN04 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Gm12795-201ENSMUST00000117594 539 ntBASIC11.82□□□□□ -0.52
Usp30Q3UN04 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Gm22442-201ENSMUST00000157256 144 ntBASIC11.82□□□□□ -0.52
Usp30Q3UN04 Gm23153-201ENSMUST00000175323 313 ntBASIC11.82□□□□□ -0.52
Usp30Q3UN04 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.82□□□□□ -0.52
Usp30Q3UN04 Gm37981-201ENSMUST00000194280 535 ntBASIC11.82□□□□□ -0.52
Usp30Q3UN04 Gm34023-201ENSMUST00000195539 217 ntBASIC11.82□□□□□ -0.52
Usp30Q3UN04 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.82□□□□□ -0.52
Usp30Q3UN04 Gm5982-201ENSMUST00000196234 512 ntBASIC11.82□□□□□ -0.52
Usp30Q3UN04 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Usp30Q3UN04 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.82□□□□□ -0.52
Usp30Q3UN04 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Usp30Q3UN04 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.82□□□□□ -0.52
Usp30Q3UN04 Olfr584-201ENSMUST00000098210 964 ntBASIC11.82□□□□□ -0.52
Usp30Q3UN04 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.82□□□□□ -0.52
Usp30Q3UN04 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.82□□□□□ -0.52
Usp30Q3UN04 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp30Q3UN04 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.81□□□□□ -0.52
Usp30Q3UN04 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.81□□□□□ -0.52
Usp30Q3UN04 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Gm12419-201ENSMUST00000116649 636 ntBASIC11.81□□□□□ -0.52
Usp30Q3UN04 Gm12899-201ENSMUST00000120565 551 ntBASIC11.81□□□□□ -0.52
Usp30Q3UN04 Gm9089-201ENSMUST00000122027 526 ntBASIC11.81□□□□□ -0.52
Usp30Q3UN04 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Usp30Q3UN04 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.81□□□□□ -0.52
Usp30Q3UN04 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp30Q3UN04 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms